Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.69□□□□□ -0.22
Sox6P40645 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.69□□□□□ -0.22
Sox6P40645 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.69□□□□□ -0.22
Sox6P40645 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox6P40645 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox6P40645 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox6P40645 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox6P40645 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox6P40645 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox6P40645 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.68□□□□□ -0.22
Sox6P40645 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox6P40645 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox6P40645 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox6P40645 Gm45167-201ENSMUST00000208007 322 ntBASIC13.68□□□□□ -0.22
Sox6P40645 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox6P40645 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox6P40645 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox6P40645 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox6P40645 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Sox6P40645 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sox6P40645 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Sox6P40645 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.67□□□□□ -0.22
Sox6P40645 Gm23547-201ENSMUST00000158210 271 ntBASIC13.67□□□□□ -0.22
Sox6P40645 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox6P40645 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.67□□□□□ -0.22
Sox6P40645 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sox6P40645 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox6P40645 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox6P40645 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox6P40645 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox6P40645 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms