Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LdlrP35951 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.49□□□□□ -0.09
LdlrP35951 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.49□□□□□ -0.09
LdlrP35951 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.49□□□□□ -0.09
LdlrP35951 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LdlrP35951 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
LdlrP35951 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.48□□□□□ -0.09
LdlrP35951 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.48□□□□□ -0.09
LdlrP35951 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
LdlrP35951 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LdlrP35951 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
LdlrP35951 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.48□□□□□ -0.09
LdlrP35951 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LdlrP35951 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.48□□□□□ -0.09
LdlrP35951 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.47□□□□□ -0.09
LdlrP35951 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.47□□□□□ -0.09
LdlrP35951 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LdlrP35951 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.47□□□□□ -0.09
LdlrP35951 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.47□□□□□ -0.09
LdlrP35951 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LdlrP35951 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
LdlrP35951 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
LdlrP35951 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LdlrP35951 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LdlrP35951 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.46□□□□□ -0.09
LdlrP35951 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.46□□□□□ -0.09
LdlrP35951 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LdlrP35951 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.46□□□□□ -0.09
LdlrP35951 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.46□□□□□ -0.09
LdlrP35951 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.46□□□□□ -0.09
LdlrP35951 Gm9682-201ENSMUST00000197505 556 ntBASIC14.46□□□□□ -0.09
LdlrP35951 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms