Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VtnP29788 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
VtnP29788 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VtnP29788 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.18□□□□□ -0.3
VtnP29788 Gm27920-201ENSMUST00000183953 96 ntBASIC13.18□□□□□ -0.3
VtnP29788 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
VtnP29788 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VtnP29788 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.18□□□□□ -0.3
VtnP29788 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VtnP29788 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VtnP29788 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
VtnP29788 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.17□□□□□ -0.3
VtnP29788 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.17□□□□□ -0.3
VtnP29788 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.17□□□□□ -0.3
VtnP29788 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.17□□□□□ -0.3
VtnP29788 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.17□□□□□ -0.3
VtnP29788 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VtnP29788 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VtnP29788 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VtnP29788 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VtnP29788 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Gm20949-201ENSMUST00000206478 952 ntBASIC13.17□□□□□ -0.3
VtnP29788 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.17□□□□□ -0.3
VtnP29788 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.17□□□□□ -0.3
VtnP29788 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.17□□□□□ -0.3
VtnP29788 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
VtnP29788 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
VtnP29788 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VtnP29788 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VtnP29788 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.16□□□□□ -0.3
VtnP29788 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.16□□□□□ -0.3
VtnP29788 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.16□□□□□ -0.3
VtnP29788 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.16□□□□□ -0.3
VtnP29788 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.16□□□□□ -0.3
VtnP29788 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VtnP29788 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms