Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.58□□□□□ -0.24
Clk1P22518 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.58□□□□□ -0.24
Clk1P22518 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Clk1P22518 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.58□□□□□ -0.24
Clk1P22518 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clk1P22518 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Clk1P22518 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clk1P22518 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.57□□□□□ -0.24
Clk1P22518 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Clk1P22518 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.57□□□□□ -0.24
Clk1P22518 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.57□□□□□ -0.24
Clk1P22518 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.57□□□□□ -0.24
Clk1P22518 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.57□□□□□ -0.24
Clk1P22518 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clk1P22518 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Clk1P22518 Mir8117-201ENSMUST00000184773 107 ntBASIC13.57□□□□□ -0.24
Clk1P22518 Gm6443-201ENSMUST00000203599 874 ntBASIC13.57□□□□□ -0.24
Clk1P22518 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Clk1P22518 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.57□□□□□ -0.24
Clk1P22518 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.57□□□□□ -0.24
Clk1P22518 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clk1P22518 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.56□□□□□ -0.24
Clk1P22518 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Clk1P22518 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Gm44771-201ENSMUST00000206975 626 ntBASIC13.56□□□□□ -0.24
Clk1P22518 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.56□□□□□ -0.24
Clk1P22518 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.56□□□□□ -0.24
Clk1P22518 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.56□□□□□ -0.24
Clk1P22518 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Clk1P22518 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.56□□□□□ -0.24
Clk1P22518 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.56□□□□□ -0.24
Clk1P22518 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clk1P22518 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Clk1P22518 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.55□□□□□ -0.24
Clk1P22518 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms