Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
BdnfP21237 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
BdnfP21237 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
BdnfP21237 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.96□□□□□ -0.17
BdnfP21237 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.96□□□□□ -0.17
BdnfP21237 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
BdnfP21237 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
BdnfP21237 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
BdnfP21237 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BdnfP21237 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
BdnfP21237 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
BdnfP21237 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.96□□□□□ -0.18
BdnfP21237 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
BdnfP21237 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BdnfP21237 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.95□□□□□ -0.18
BdnfP21237 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Gm4899-201ENSMUST00000178708 719 ntBASIC13.95□□□□□ -0.18
BdnfP21237 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.95□□□□□ -0.18
BdnfP21237 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BdnfP21237 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.95□□□□□ -0.18
BdnfP21237 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BdnfP21237 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BdnfP21237 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
BdnfP21237 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BdnfP21237 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BdnfP21237 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
BdnfP21237 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BdnfP21237 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
BdnfP21237 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BdnfP21237 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BdnfP21237 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.94□□□□□ -0.18
BdnfP21237 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Mir8098-201ENSMUST00000184011 137 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.94□□□□□ -0.18
BdnfP21237 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Gm10060-201ENSMUST00000212002 111 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms