Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.81□□□□□ -0.04
Hmga1P17095 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Gm6218-201ENSMUST00000219812 628 ntBASIC14.81□□□□□ -0.04
Hmga1P17095 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hmga1P17095 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.81□□□□□ -0.04
Hmga1P17095 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmga1P17095 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hmga1P17095 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hmga1P17095 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.8□□□□□ -0.04
Hmga1P17095 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Gm22189-201ENSMUST00000103822 86 ntBASIC14.8□□□□□ -0.04
Hmga1P17095 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hmga1P17095 Gm9522-201ENSMUST00000182394 926 ntBASIC14.8□□□□□ -0.04
Hmga1P17095 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Gm20445-201ENSMUST00000061905 565 ntBASIC14.8□□□□□ -0.04
Hmga1P17095 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.8□□□□□ -0.04
Hmga1P17095 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Hmga1P17095 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Hmga1P17095 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmga1P17095 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmga1P17095 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Hmga1P17095 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Hmga1P17095 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Hmga1P17095 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmga1P17095 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hmga1P17095 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hmga1P17095 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hmga1P17095 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Hmga1P17095 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmga1P17095 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmga1P17095 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hmga1P17095 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.78□□□□□ -0.04
Hmga1P17095 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.78□□□□□ -0.04
Hmga1P17095 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmga1P17095 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.78□□□□□ -0.04
Hmga1P17095 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Gm15957-201ENSMUST00000118893 974 ntBASIC14.78□□□□□ -0.04
Hmga1P17095 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmga1P17095 Gm33320-201ENSMUST00000192232 530 ntBASIC14.78□□□□□ -0.04
Hmga1P17095 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hmga1P17095 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.78□□□□□ -0.04
Hmga1P17095 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.78□□□□□ -0.04
Hmga1P17095 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms