Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cntn1P12960 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cntn1P12960 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cntn1P12960 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cntn1P12960 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cntn1P12960 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.96□□□□□ -0.18
Cntn1P12960 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cntn1P12960 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cntn1P12960 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Gm27618-201ENSMUST00000183671 60 ntBASIC13.95□□□□□ -0.18
Cntn1P12960 Gm27622-201ENSMUST00000183779 60 ntBASIC13.95□□□□□ -0.18
Cntn1P12960 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Gm20949-201ENSMUST00000206478 952 ntBASIC13.95□□□□□ -0.18
Cntn1P12960 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cntn1P12960 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cntn1P12960 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.94□□□□□ -0.18
Cntn1P12960 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.94□□□□□ -0.18
Cntn1P12960 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Cntn1P12960 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cntn1P12960 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.94□□□□□ -0.18
Cntn1P12960 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.94□□□□□ -0.18
Cntn1P12960 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cntn1P12960 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cntn1P12960 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cntn1P12960 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cntn1P12960 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.93□□□□□ -0.18
Cntn1P12960 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.93□□□□□ -0.18
Cntn1P12960 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.93□□□□□ -0.18
Cntn1P12960 Olfr286-202ENSMUST00000205305 969 ntBASIC13.93□□□□□ -0.18
Cntn1P12960 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.93□□□□□ -0.18
Cntn1P12960 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.93□□□□□ -0.18
Cntn1P12960 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cntn1P12960 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cntn1P12960 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms