Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.74■□□□□ 0.59
Hoxc9P09633 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.74■□□□□ 0.59
Hoxc9P09633 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hoxc9P09633 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hoxc9P09633 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Carlr-201ENSMUST00000181515 2574 ntBASIC18.73■□□□□ 0.59
Hoxc9P09633 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Hoxc9P09633 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.73■□□□□ 0.59
Hoxc9P09633 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Gm9002-201ENSMUST00000178437 499 ntBASIC18.73■□□□□ 0.59
Hoxc9P09633 Gm4804-201ENSMUST00000182234 999 ntBASIC18.73■□□□□ 0.59
Hoxc9P09633 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.73■□□□□ 0.59
Hoxc9P09633 Gm6266-201ENSMUST00000203844 806 ntBASIC18.73■□□□□ 0.59
Hoxc9P09633 Gm17795-201ENSMUST00000214505 757 ntBASIC18.73■□□□□ 0.59
Hoxc9P09633 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.73■□□□□ 0.59
Hoxc9P09633 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Hoxc9P09633 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hoxc9P09633 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.72■□□□□ 0.59
Hoxc9P09633 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hoxc9P09633 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.72■□□□□ 0.59
Hoxc9P09633 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxc9P09633 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.72■□□□□ 0.59
Hoxc9P09633 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.72■□□□□ 0.59
Hoxc9P09633 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.72■□□□□ 0.59
Hoxc9P09633 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hoxc9P09633 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.71■□□□□ 0.59
Hoxc9P09633 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.71■□□□□ 0.59
Hoxc9P09633 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hoxc9P09633 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Hoxc9P09633 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc9P09633 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.71■□□□□ 0.58
Hoxc9P09633 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.71■□□□□ 0.58
Hoxc9P09633 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Gm15240-201ENSMUST00000118156 720 ntBASIC18.7■□□□□ 0.58
Hoxc9P09633 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc9P09633 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc9P09633 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms