Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Gm12644-201ENSMUST00000119935 606 ntBASIC13.77□□□□□ -0.21
ApoeP08226 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ApoeP08226 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ApoeP08226 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.76□□□□□ -0.21
ApoeP08226 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.76□□□□□ -0.21
ApoeP08226 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.76□□□□□ -0.21
ApoeP08226 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.76□□□□□ -0.21
ApoeP08226 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.76□□□□□ -0.21
ApoeP08226 Gm27704-201ENSMUST00000185094 107 ntBASIC13.76□□□□□ -0.21
ApoeP08226 Gm37153-201ENSMUST00000193637 231 ntBASIC13.76□□□□□ -0.21
ApoeP08226 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.76□□□□□ -0.21
ApoeP08226 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.76□□□□□ -0.21
ApoeP08226 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.76□□□□□ -0.21
ApoeP08226 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ApoeP08226 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.75□□□□□ -0.21
ApoeP08226 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Gm14042-201ENSMUST00000120139 833 ntBASIC13.75□□□□□ -0.21
ApoeP08226 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.75□□□□□ -0.21
ApoeP08226 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
ApoeP08226 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ApoeP08226 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ApoeP08226 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
ApoeP08226 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ApoeP08226 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.74□□□□□ -0.21
ApoeP08226 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.74□□□□□ -0.21
ApoeP08226 Gm13464-201ENSMUST00000119418 935 ntBASIC13.74□□□□□ -0.21
ApoeP08226 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Gm4535-201ENSMUST00000182274 558 ntBASIC13.74□□□□□ -0.21
ApoeP08226 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
ApoeP08226 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ApoeP08226 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms