Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
P06320 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
P06320 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC9.2□□□□□ -0.94
P06320 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
P06320 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC9.2□□□□□ -0.94
P06320 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.2□□□□□ -0.94
P06320 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Gm22697-201ENSMUST00000175194 63 ntBASIC9.2□□□□□ -0.94
P06320 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Gm7889-201ENSMUST00000185591 958 ntBASIC9.2□□□□□ -0.94
P06320 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC9.2□□□□□ -0.94
P06320 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.2□□□□□ -0.94
P06320 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 CT025689.6-201ENSMUST00000224991 1104 ntBASIC9.2□□□□□ -0.94
P06320 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
P06320 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.2□□□□□ -0.94
P06320 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC9.2□□□□□ -0.94
P06320 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
P06320 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
P06320 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
P06320 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
P06320 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.19□□□□□ -0.94
P06320 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.19□□□□□ -0.94
P06320 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
P06320 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
P06320 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
P06320 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC9.19□□□□□ -0.94
P06320 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
P06320 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Gm12669-201ENSMUST00000122162 1009 ntBASIC9.19□□□□□ -0.94
P06320 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC9.19□□□□□ -0.94
P06320 Gm20472-201ENSMUST00000174403 1240 ntBASIC9.19□□□□□ -0.94
P06320 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
P06320 Gm37055-201ENSMUST00000191866 133 ntBASIC9.19□□□□□ -0.94
P06320 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC9.19□□□□□ -0.94
P06320 AC117588.1-201ENSMUST00000228510 999 ntBASIC9.19□□□□□ -0.94
P06320 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
P06320 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
P06320 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
P06320 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.19□□□□□ -0.94
P06320 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
P06320 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.19□□□□□ -0.94
P06320 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
P06320 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
P06320 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
P06320 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P06320 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms