Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Setdb1O88974 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.69■□□□□ 0.42
Setdb1O88974 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Setdb1O88974 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Setdb1O88974 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.69■□□□□ 0.42
Setdb1O88974 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.69■□□□□ 0.42
Setdb1O88974 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.69■□□□□ 0.42
Setdb1O88974 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Setdb1O88974 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Setdb1O88974 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Setdb1O88974 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Setdb1O88974 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Setdb1O88974 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Setdb1O88974 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Setdb1O88974 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.68■□□□□ 0.42
Setdb1O88974 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Setdb1O88974 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Gm9002-201ENSMUST00000178437 499 ntBASIC17.68■□□□□ 0.42
Setdb1O88974 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.68■□□□□ 0.42
Setdb1O88974 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.68■□□□□ 0.42
Setdb1O88974 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Setdb1O88974 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.67■□□□□ 0.42
Setdb1O88974 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Setdb1O88974 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.67■□□□□ 0.42
Setdb1O88974 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Setdb1O88974 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Gm37230-201ENSMUST00000194491 818 ntBASIC17.67■□□□□ 0.42
Setdb1O88974 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.67■□□□□ 0.42
Setdb1O88974 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Dupd1-202ENSMUST00000224735 548 ntBASIC17.67■□□□□ 0.42
Setdb1O88974 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Setdb1O88974 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Setdb1O88974 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Setdb1O88974 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Setdb1O88974 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Mir1982-201ENSMUST00000157368 74 ntBASIC17.66■□□□□ 0.42
Setdb1O88974 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Setdb1O88974 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.66■□□□□ 0.42
Setdb1O88974 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.66■□□□□ 0.42
Setdb1O88974 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Setdb1O88974 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Setdb1O88974 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Setdb1O88974 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Setdb1O88974 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Setdb1O88974 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms