Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ClppO88696 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.25□□□□□ -0.13
ClppO88696 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ClppO88696 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ClppO88696 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
ClppO88696 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.24□□□□□ -0.13
ClppO88696 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
ClppO88696 Gm16026-204ENSMUST00000162652 683 ntBASIC14.24□□□□□ -0.13
ClppO88696 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.24□□□□□ -0.13
ClppO88696 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.24□□□□□ -0.13
ClppO88696 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ClppO88696 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ClppO88696 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.23□□□□□ -0.13
ClppO88696 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.23□□□□□ -0.13
ClppO88696 Gm14057-201ENSMUST00000120631 482 ntBASIC14.23□□□□□ -0.13
ClppO88696 Gm11543-201ENSMUST00000120758 370 ntBASIC14.23□□□□□ -0.13
ClppO88696 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClppO88696 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClppO88696 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClppO88696 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ClppO88696 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.22□□□□□ -0.13
ClppO88696 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClppO88696 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.22□□□□□ -0.13
ClppO88696 Gm24158-201ENSMUST00000175263 71 ntBASIC14.22□□□□□ -0.13
ClppO88696 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.22□□□□□ -0.13
ClppO88696 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClppO88696 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClppO88696 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms