Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp8O70138 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp8O70138 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.73■□□□□ 0.43
Mmp8O70138 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.73■□□□□ 0.43
Mmp8O70138 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Mmp8O70138 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp8O70138 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.72■□□□□ 0.43
Mmp8O70138 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.72■□□□□ 0.43
Mmp8O70138 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
Mmp8O70138 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp8O70138 Gm25948-201ENSMUST00000175334 112 ntBASIC17.72■□□□□ 0.43
Mmp8O70138 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.72■□□□□ 0.43
Mmp8O70138 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp8O70138 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.72■□□□□ 0.43
Mmp8O70138 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp8O70138 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mmp8O70138 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp8O70138 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Mmp8O70138 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mmp8O70138 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp8O70138 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp8O70138 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.7■□□□□ 0.42
Mmp8O70138 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp8O70138 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp8O70138 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.7■□□□□ 0.42
Mmp8O70138 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.7■□□□□ 0.42
Mmp8O70138 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp8O70138 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp8O70138 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.69■□□□□ 0.42
Mmp8O70138 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.69■□□□□ 0.42
Mmp8O70138 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.69■□□□□ 0.42
Mmp8O70138 Gm6222-201ENSMUST00000120787 396 ntBASIC17.69■□□□□ 0.42
Mmp8O70138 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp8O70138 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp8O70138 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.69■□□□□ 0.42
Mmp8O70138 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.69■□□□□ 0.42
Mmp8O70138 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp8O70138 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms