Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.69□□□□□ -0.06
Phox2bO35690 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Phox2bO35690 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Phox2bO35690 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.69□□□□□ -0.06
Phox2bO35690 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Phox2bO35690 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Phox2bO35690 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.68□□□□□ -0.06
Phox2bO35690 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Mir6392-201ENSMUST00000184924 108 ntBASIC14.68□□□□□ -0.06
Phox2bO35690 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
Phox2bO35690 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Phox2bO35690 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Phox2bO35690 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Phox2bO35690 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm17420-201ENSMUST00000164753 153 ntBASIC14.67□□□□□ -0.06
Phox2bO35690 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.67□□□□□ -0.06
Phox2bO35690 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm9522-201ENSMUST00000182394 926 ntBASIC14.67□□□□□ -0.06
Phox2bO35690 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.67□□□□□ -0.06
Phox2bO35690 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Phox2bO35690 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Phox2bO35690 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Phox2bO35690 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Phox2bO35690 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.66□□□□□ -0.06
Phox2bO35690 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.66□□□□□ -0.06
Phox2bO35690 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.66□□□□□ -0.06
Phox2bO35690 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Phox2bO35690 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Phox2bO35690 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms