Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Alx4O35137 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.98□□□□□ -0.33
Alx4O35137 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
Alx4O35137 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Gm18669-201ENSMUST00000216049 778 ntBASIC12.98□□□□□ -0.33
Alx4O35137 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Alx4O35137 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx4O35137 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Alx4O35137 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx4O35137 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.97□□□□□ -0.33
Alx4O35137 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx4O35137 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.97□□□□□ -0.33
Alx4O35137 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx4O35137 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx4O35137 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.97□□□□□ -0.33
Alx4O35137 Gm2451-201ENSMUST00000199447 999 ntBASIC12.97□□□□□ -0.33
Alx4O35137 Gm10290-201ENSMUST00000200451 999 ntBASIC12.97□□□□□ -0.33
Alx4O35137 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Alx4O35137 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx4O35137 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.96□□□□□ -0.33
Alx4O35137 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Alx4O35137 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Alx4O35137 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.96□□□□□ -0.33
Alx4O35137 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.96□□□□□ -0.33
Alx4O35137 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Alx4O35137 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.96□□□□□ -0.33
Alx4O35137 Gm2272-201ENSMUST00000194903 582 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Gm45167-201ENSMUST00000208007 322 ntBASIC12.96□□□□□ -0.33
Alx4O35137 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx4O35137 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx4O35137 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Alx4O35137 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx4O35137 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Alx4O35137 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.96□□□□□ -0.34
Alx4O35137 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms