Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.73■□□□□ 0.11
Ube3aO08759 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.73■□□□□ 0.11
Ube3aO08759 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.73■□□□□ 0.11
Ube3aO08759 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.73■□□□□ 0.11
Ube3aO08759 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ube3aO08759 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ube3aO08759 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ube3aO08759 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.72■□□□□ 0.11
Ube3aO08759 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.72■□□□□ 0.11
Ube3aO08759 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ube3aO08759 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube3aO08759 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3aO08759 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Ube3aO08759 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ube3aO08759 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube3aO08759 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.71■□□□□ 0.11
Ube3aO08759 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ube3aO08759 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ube3aO08759 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ube3aO08759 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ube3aO08759 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.71■□□□□ 0.11
Ube3aO08759 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3aO08759 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3aO08759 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ube3aO08759 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3aO08759 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Ube3aO08759 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube3aO08759 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3aO08759 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3aO08759 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ube3aO08759 Gm11452-201ENSMUST00000122376 690 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Gm9726-201ENSMUST00000180321 678 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 Gm7787-201ENSMUST00000216858 688 ntBASIC15.7■□□□□ 0.1
Ube3aO08759 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3aO08759 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3aO08759 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3aO08759 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms