Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Gm12742-201ENSMUST00000117326 410 ntBASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Gm2495-201ENSMUST00000191160 466 ntBASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
B020004C17RikJ3QP07 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
B020004C17RikJ3QP07 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm27839-201ENSMUST00000184242 106 ntBASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm37714-201ENSMUST00000194742 342 ntBASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm8463-201ENSMUST00000208573 613 ntBASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
B020004C17RikJ3QP07 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms