Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Nkx1-1G3UXB3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nkx1-1G3UXB3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx1-1G3UXB3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Nkx1-1G3UXB3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx1-1G3UXB3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm14938-201ENSMUST00000119482 943 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm45078-201ENSMUST00000205343 546 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm45401-201ENSMUST00000209456 733 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 AC156952.1-201ENSMUST00000220361 793 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx1-1G3UXB3 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm44364-201ENSMUST00000198368 141 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm45880-201ENSMUST00000213041 853 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm9182-201ENSMUST00000217829 639 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx1-1G3UXB3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Nkx1-1G3UXB3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.83■□□□□ 0.29
Nkx1-1G3UXB3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm15161-201ENSMUST00000117340 387 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm26083-201ENSMUST00000157904 193 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm43747-201ENSMUST00000201412 1330 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Gm18307-201ENSMUST00000206864 949 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 AC121567.1-201ENSMUST00000227213 842 ntBASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx1-1G3UXB3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-1G3UXB3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-1G3UXB3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms