Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm13408-201ENSMUST00000119822 798 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm13935-201ENSMUST00000121859 798 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm10275-202ENSMUST00000168697 495 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Gm10275-201ENSMUST00000092620 635 ntBASIC14.25□□□□□ -0.13
Col6a3E9PWQ3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm8894-201ENSMUST00000074642 666 ntBASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm16397-201ENSMUST00000122201 494 ntBASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a3E9PWQ3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm11222-201ENSMUST00000119005 738 ntBASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Gm37905-201ENSMUST00000195310 341 ntBASIC14.23□□□□□ -0.13
Col6a3E9PWQ3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a3E9PWQ3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms