Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gm28043E0CXC2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm15590-201ENSMUST00000078419 552 ntBASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.61□□□□□ -0.07
Gm28043E0CXC2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.6□□□□□ -0.07
Gm28043E0CXC2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28043E0CXC2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gm27628-201ENSMUST00000184911 107 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms