Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm18473-201ENSMUST00000220543 868 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm14723-201ENSMUST00000118686 215 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm24420-201ENSMUST00000176676 59 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Ankra2-208ENSMUST00000226100 1476 ntBASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hfm1D3Z4R1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hfm1D3Z4R1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hfm1D3Z4R1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hfm1D3Z4R1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC20.08■□□□□ 0.8
Hfm1D3Z4R1 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Gm15371-201ENSMUST00000117057 784 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Gm11557-201ENSMUST00000120200 1008 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Gm8927-201ENSMUST00000181978 981 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 CT485787.1-201ENSMUST00000225617 968 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Gm3222-201ENSMUST00000071282 990 ntBASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hfm1D3Z4R1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Proscos-202ENSMUST00000178990 666 ntBASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Gm9823-201ENSMUST00000051212 327 ntBASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hfm1D3Z4R1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms