Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.12□□□□□ -0.15
Clip3B9EHT4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.12□□□□□ -0.15
Clip3B9EHT4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.12□□□□□ -0.15
Clip3B9EHT4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.11□□□□□ -0.15
Clip3B9EHT4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.11□□□□□ -0.15
Clip3B9EHT4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.11□□□□□ -0.15
Clip3B9EHT4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clip3B9EHT4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.1□□□□□ -0.15
Clip3B9EHT4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clip3B9EHT4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.09□□□□□ -0.15
Clip3B9EHT4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms