Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm45118-201ENSMUST00000208928 825 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 BC001981-202ENSMUST00000191393 1545 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm8810-201ENSMUST00000172895 754 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm27023-201ENSMUST00000182372 285 ntBASIC11.66□□□□□ -0.54
Chd6A3KFM7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.65□□□□□ -0.54
Chd6A3KFM7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Gm8213-201ENSMUST00000118191 441 ntBASIC11.65□□□□□ -0.54
Chd6A3KFM7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd6A3KFM7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Gm10608-202ENSMUST00000213924 676 ntBASIC11.65□□□□□ -0.55
Chd6A3KFM7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd6A3KFM7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm12217-201ENSMUST00000118858 696 ntBASIC11.64□□□□□ -0.55
Chd6A3KFM7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.64□□□□□ -0.55
Chd6A3KFM7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd6A3KFM7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms