Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm17795-201ENSMUST00000214505 757 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm14005-208ENSMUST00000223654 681 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 AC160980.1-201ENSMUST00000224136 970 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm43447-201ENSMUST00000198471 1535 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Rmrp-201ENSMUST00000157463 271 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 AL732506.1-201ENSMUST00000226420 281 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Spcs1-203ENSMUST00000226374 592 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm6023-201ENSMUST00000118217 606 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Gm6867-201ENSMUST00000219165 425 ntBASIC7.5□□□□□ -1.21
Ubr4A2AN08 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ubr4A2AN08 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm13408-201ENSMUST00000119822 798 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm13935-201ENSMUST00000121859 798 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm4862-201ENSMUST00000170405 438 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm11841-201ENSMUST00000117060 1963 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm28265-201ENSMUST00000188201 2319 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Gm37230-201ENSMUST00000194491 818 ntBASIC7.49□□□□□ -1.21
Ubr4A2AN08 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ubr4A2AN08 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms