Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc112A0AUP1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm14042-201ENSMUST00000120139 833 ntBASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm13597-201ENSMUST00000121239 375 ntBASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm16026-204ENSMUST00000162652 683 ntBASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm28659-201ENSMUST00000188013 759 ntBASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc112A0AUP1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Gm10819-201ENSMUST00000099988 561 ntBASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc112A0AUP1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Mir5126-201ENSMUST00000175513 77 ntBASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc112A0AUP1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms