Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-1A0A075B699 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Mir8098-201ENSMUST00000184011 137 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 AV026068-213ENSMUST00000223675 1171 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-1A0A075B699 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Gm15590-201ENSMUST00000078419 552 ntBASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trav9d-1A0A075B699 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9d-1A0A075B699 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms