Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gm13464-201ENSMUST00000119418 935 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.93□□□□□ -0.5
Trav18A0A075B656 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav18A0A075B656 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.92□□□□□ -0.5
Trav18A0A075B656 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm27300-201ENSMUST00000184085 97 ntBASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm27335-201ENSMUST00000184758 97 ntBASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm15590-201ENSMUST00000078419 552 ntBASIC11.92□□□□□ -0.5
Trav18A0A075B656 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav18A0A075B656 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav18A0A075B656 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav18A0A075B656 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms