Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.04■□□□□ 0.48
Crlf1Q9JM58 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Crlf1Q9JM58 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Crlf1Q9JM58 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Crlf1Q9JM58 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Crlf1Q9JM58 Gm22238-201ENSMUST00000175222 88 ntBASIC18.01■□□□□ 0.47
Crlf1Q9JM58 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.01■□□□□ 0.47
Crlf1Q9JM58 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Crlf1Q9JM58 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Crlf1Q9JM58 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18■□□□□ 0.47
Crlf1Q9JM58 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18■□□□□ 0.47
Crlf1Q9JM58 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crlf1Q9JM58 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Crlf1Q9JM58 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Crlf1Q9JM58 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Crlf1Q9JM58 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crlf1Q9JM58 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crlf1Q9JM58 Gm12821-201ENSMUST00000120022 600 ntBASIC17.98■□□□□ 0.47
Crlf1Q9JM58 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Crlf1Q9JM58 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Crlf1Q9JM58 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crlf1Q9JM58 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Crlf1Q9JM58 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.97■□□□□ 0.47
Crlf1Q9JM58 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf1Q9JM58 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf1Q9JM58 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf1Q9JM58 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf1Q9JM58 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.95■□□□□ 0.46
Crlf1Q9JM58 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf1Q9JM58 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf1Q9JM58 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf1Q9JM58 Gm12922-201ENSMUST00000120626 809 ntBASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf1Q9JM58 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf1Q9JM58 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Crlf1Q9JM58 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf1Q9JM58 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crlf1Q9JM58 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.91■□□□□ 0.46
Crlf1Q9JM58 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crlf1Q9JM58 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Crlf1Q9JM58 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.9■□□□□ 0.46
Crlf1Q9JM58 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Crlf1Q9JM58 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.89■□□□□ 0.45
Crlf1Q9JM58 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Crlf1Q9JM58 Gm40881-201ENSMUST00000223397 166 ntBASIC17.89■□□□□ 0.45
Crlf1Q9JM58 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Crlf1Q9JM58 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crlf1Q9JM58 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crlf1Q9JM58 Gm27454-201ENSMUST00000185090 204 ntBASIC17.88■□□□□ 0.45
Crlf1Q9JM58 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Crlf1Q9JM58 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.88■□□□□ 0.45
Crlf1Q9JM58 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crlf1Q9JM58 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Crlf1Q9JM58 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crlf1Q9JM58 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crlf1Q9JM58 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Crlf1Q9JM58 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Crlf1Q9JM58 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms