Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.52■□□□□ 0.56
Rcl1Q9JJT0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rcl1Q9JJT0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rcl1Q9JJT0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rcl1Q9JJT0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rcl1Q9JJT0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rcl1Q9JJT0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rcl1Q9JJT0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rcl1Q9JJT0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rcl1Q9JJT0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.49■□□□□ 0.55
Rcl1Q9JJT0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rcl1Q9JJT0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rcl1Q9JJT0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rcl1Q9JJT0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rcl1Q9JJT0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rcl1Q9JJT0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rcl1Q9JJT0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rcl1Q9JJT0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rcl1Q9JJT0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rcl1Q9JJT0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rcl1Q9JJT0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rcl1Q9JJT0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rcl1Q9JJT0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rcl1Q9JJT0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rcl1Q9JJT0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rcl1Q9JJT0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rcl1Q9JJT0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rcl1Q9JJT0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rcl1Q9JJT0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rcl1Q9JJT0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rcl1Q9JJT0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rcl1Q9JJT0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rcl1Q9JJT0 Gm37136-201ENSMUST00000194368 194 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms