Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chchd1Q9CQA6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chchd1Q9CQA6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
Chchd1Q9CQA6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chchd1Q9CQA6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chchd1Q9CQA6 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.79■□□□□ 0.28
Chchd1Q9CQA6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chchd1Q9CQA6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chchd1Q9CQA6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chchd1Q9CQA6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chchd1Q9CQA6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chchd1Q9CQA6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chchd1Q9CQA6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chchd1Q9CQA6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chchd1Q9CQA6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chchd1Q9CQA6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chchd1Q9CQA6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chchd1Q9CQA6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chchd1Q9CQA6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chchd1Q9CQA6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chchd1Q9CQA6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chchd1Q9CQA6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.7■□□□□ 0.26
Chchd1Q9CQA6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chchd1Q9CQA6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chchd1Q9CQA6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chchd1Q9CQA6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chchd1Q9CQA6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chchd1Q9CQA6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chchd1Q9CQA6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chchd1Q9CQA6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms