Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim16Q99PP9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim16Q99PP9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim16Q99PP9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim16Q99PP9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
Trim16Q99PP9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim16Q99PP9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim16Q99PP9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Trim16Q99PP9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim16Q99PP9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Terc-201ENSMUST00000082862 423 ntBASIC21.38■■□□□ 1.01
Trim16Q99PP9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim16Q99PP9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Gm9806-201ENSMUST00000051080 552 ntBASIC21.37■■□□□ 1.01
Trim16Q99PP9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim16Q99PP9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.36■■□□□ 1.01
Trim16Q99PP9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim16Q99PP9 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.36■■□□□ 1.01
Trim16Q99PP9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Trim16Q99PP9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim16Q99PP9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim16Q99PP9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim16Q99PP9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim16Q99PP9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim16Q99PP9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim16Q99PP9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Trim16Q99PP9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim16Q99PP9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim16Q99PP9 Gm16437-201ENSMUST00000025669 507 ntBASIC21.33■■□□□ 1.01
Trim16Q99PP9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim16Q99PP9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.32■■□□□ 1
Trim16Q99PP9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim16Q99PP9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.32■■□□□ 1
Trim16Q99PP9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim16Q99PP9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim16Q99PP9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Trim16Q99PP9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim16Q99PP9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Trim16Q99PP9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.31■■□□□ 1
Trim16Q99PP9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim16Q99PP9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Trim16Q99PP9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Trim16Q99PP9 Gm11687-201ENSMUST00000118911 886 ntBASIC21.3■■□□□ 1
Trim16Q99PP9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim16Q99PP9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim16Q99PP9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim16Q99PP9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim16Q99PP9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trim16Q99PP9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim16Q99PP9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.29■■□□□ 1
Trim16Q99PP9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim16Q99PP9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim16Q99PP9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim16Q99PP9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim16Q99PP9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim16Q99PP9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.27■■□□□ 1
Trim16Q99PP9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Trim16Q99PP9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim16Q99PP9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim16Q99PP9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim16Q99PP9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim16Q99PP9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim16Q99PP9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim16Q99PP9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Trim16Q99PP9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim16Q99PP9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Trim16Q99PP9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim16Q99PP9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim16Q99PP9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms