Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhgb4Q91XX6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhgb4Q91XX6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhgb4Q91XX6 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhgb4Q91XX6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhgb4Q91XX6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Pcdhgb4Q91XX6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhgb4Q91XX6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhgb4Q91XX6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.35■■□□□ 1.33
Pcdhgb4Q91XX6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhgb4Q91XX6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhgb4Q91XX6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhgb4Q91XX6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhgb4Q91XX6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhgb4Q91XX6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhgb4Q91XX6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Pcdhgb4Q91XX6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhgb4Q91XX6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.33■■□□□ 1.33
Pcdhgb4Q91XX6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhgb4Q91XX6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhgb4Q91XX6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Pcdhgb4Q91XX6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhgb4Q91XX6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhgb4Q91XX6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdhgb4Q91XX6 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.31■■□□□ 1.32
Pcdhgb4Q91XX6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhgb4Q91XX6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhgb4Q91XX6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhgb4Q91XX6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Pcdhgb4Q91XX6 Scarna2-201ENSMUST00000157560 414 ntBASIC23.3■■□□□ 1.32
Pcdhgb4Q91XX6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhgb4Q91XX6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.29■■□□□ 1.32
Pcdhgb4Q91XX6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgb4Q91XX6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgb4Q91XX6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdhgb4Q91XX6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Pcdhgb4Q91XX6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgb4Q91XX6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhgb4Q91XX6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgb4Q91XX6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgb4Q91XX6 Gm16437-201ENSMUST00000025669 507 ntBASIC23.26■■□□□ 1.31
Pcdhgb4Q91XX6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgb4Q91XX6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Pcdhgb4Q91XX6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgb4Q91XX6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgb4Q91XX6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb4Q91XX6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb4Q91XX6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgb4Q91XX6 Gm9806-201ENSMUST00000051080 552 ntBASIC23.23■■□□□ 1.31
Pcdhgb4Q91XX6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Pcdhgb4Q91XX6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgb4Q91XX6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.21■■□□□ 1.31
Pcdhgb4Q91XX6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.21■■□□□ 1.31
Pcdhgb4Q91XX6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdhgb4Q91XX6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgb4Q91XX6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms