Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc58Q8R3Q6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc58Q8R3Q6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc58Q8R3Q6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc58Q8R3Q6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc58Q8R3Q6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms