Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Mrpl47Q8K2Y7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mrpl47Q8K2Y7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.88■■□□□ 1.09
Mrpl47Q8K2Y7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mrpl47Q8K2Y7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mrpl47Q8K2Y7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Mrpl47Q8K2Y7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Mrpl47Q8K2Y7 Gm9812-201ENSMUST00000061934 968 ntBASIC21.85■■□□□ 1.09
Mrpl47Q8K2Y7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Mrpl47Q8K2Y7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Mrpl47Q8K2Y7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mrpl47Q8K2Y7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.84■■□□□ 1.09
Mrpl47Q8K2Y7 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.84■■□□□ 1.09
Mrpl47Q8K2Y7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mrpl47Q8K2Y7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mrpl47Q8K2Y7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mrpl47Q8K2Y7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mrpl47Q8K2Y7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Mrpl47Q8K2Y7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Mrpl47Q8K2Y7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mrpl47Q8K2Y7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Mrpl47Q8K2Y7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mrpl47Q8K2Y7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mrpl47Q8K2Y7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Mrpl47Q8K2Y7 Mir3960-201ENSMUST00000198213 73 ntBASIC21.78■■□□□ 1.08
Mrpl47Q8K2Y7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mrpl47Q8K2Y7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Mrpl47Q8K2Y7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Mrpl47Q8K2Y7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mrpl47Q8K2Y7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.75■■□□□ 1.07
Mrpl47Q8K2Y7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Mrpl47Q8K2Y7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mrpl47Q8K2Y7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Mrpl47Q8K2Y7 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.74■■□□□ 1.07
Mrpl47Q8K2Y7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms