Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Smc4Q8CG47 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Smc4Q8CG47 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
Smc4Q8CG47 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Smc4Q8CG47 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.39■■□□□ 1.98
Smc4Q8CG47 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Smc4Q8CG47 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc4Q8CG47 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.38■■□□□ 1.97
Smc4Q8CG47 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Smc4Q8CG47 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc4Q8CG47 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Smc4Q8CG47 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.37■■□□□ 1.97
Smc4Q8CG47 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.37■■□□□ 1.97
Smc4Q8CG47 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc4Q8CG47 Nsd1-203ENSMUST00000224156 1149 ntBASIC27.37■■□□□ 1.97
Smc4Q8CG47 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Smc4Q8CG47 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc4Q8CG47 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc4Q8CG47 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc4Q8CG47 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Smc4Q8CG47 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Smc4Q8CG47 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Smc4Q8CG47 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.35■■□□□ 1.97
Smc4Q8CG47 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.34■■□□□ 1.97
Smc4Q8CG47 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Smc4Q8CG47 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc4Q8CG47 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Smc4Q8CG47 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Smc4Q8CG47 Gm5812-201ENSMUST00000061073 957 ntBASIC27.32■■□□□ 1.96
Smc4Q8CG47 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Smc4Q8CG47 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Smc4Q8CG47 Gm45444-201ENSMUST00000211394 898 ntBASIC27.31■■□□□ 1.96
Smc4Q8CG47 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
Smc4Q8CG47 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC27.31■■□□□ 1.96
Smc4Q8CG47 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Smc4Q8CG47 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc4Q8CG47 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
Smc4Q8CG47 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc4Q8CG47 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc4Q8CG47 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.29■■□□□ 1.96
Smc4Q8CG47 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Smc4Q8CG47 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
Smc4Q8CG47 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smc4Q8CG47 Gm43566-201ENSMUST00000196851 808 ntBASIC27.28■■□□□ 1.96
Smc4Q8CG47 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smc4Q8CG47 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smc4Q8CG47 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.27■■□□□ 1.96
Smc4Q8CG47 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc4Q8CG47 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Smc4Q8CG47 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Smc4Q8CG47 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Smc4Q8CG47 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Smc4Q8CG47 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc4Q8CG47 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smc4Q8CG47 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smc4Q8CG47 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Smc4Q8CG47 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Smc4Q8CG47 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Smc4Q8CG47 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
Smc4Q8CG47 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Smc4Q8CG47 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.23■■□□□ 1.95
Smc4Q8CG47 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Smc4Q8CG47 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc4Q8CG47 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.22■■□□□ 1.95
Smc4Q8CG47 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc4Q8CG47 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.22■■□□□ 1.95
Smc4Q8CG47 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc4Q8CG47 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smc4Q8CG47 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smc4Q8CG47 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc4Q8CG47 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Smc4Q8CG47 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc4Q8CG47 Gm13238-201ENSMUST00000117655 780 ntBASIC27.19■■□□□ 1.94
Smc4Q8CG47 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Smc4Q8CG47 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.19■■□□□ 1.94
Smc4Q8CG47 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc4Q8CG47 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Smc4Q8CG47 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Smc4Q8CG47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms