Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc5Q8CG46 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc5Q8CG46 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc5Q8CG46 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc5Q8CG46 Gm4799-201ENSMUST00000095396 657 ntBASIC27.57■■■□□ 2
Smc5Q8CG46 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Smc5Q8CG46 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.56■■■□□ 2
Smc5Q8CG46 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc5Q8CG46 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.56■■■□□ 2
Smc5Q8CG46 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc5Q8CG46 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.56■■■□□ 2
Smc5Q8CG46 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Smc5Q8CG46 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Smc5Q8CG46 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.55■■■□□ 2
Smc5Q8CG46 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Smc5Q8CG46 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC27.55■■■□□ 2
Smc5Q8CG46 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Smc5Q8CG46 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.54■■■□□ 2
Smc5Q8CG46 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Smc5Q8CG46 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC27.53■■■□□ 2
Smc5Q8CG46 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Smc5Q8CG46 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.53■■■□□ 2
Smc5Q8CG46 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Smc5Q8CG46 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.53■■■□□ 2
Smc5Q8CG46 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Smc5Q8CG46 AC153962.1-201ENSMUST00000218530 1948 ntBASIC27.52■■■□□ 2
Smc5Q8CG46 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Smc5Q8CG46 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.52■■■□□ 2
Smc5Q8CG46 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Smc5Q8CG46 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC27.52■■■□□ 2
Smc5Q8CG46 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.51■■□□□ 1.99
Smc5Q8CG46 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
Smc5Q8CG46 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC27.5■■□□□ 1.99
Smc5Q8CG46 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc5Q8CG46 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.5■■□□□ 1.99
Smc5Q8CG46 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc5Q8CG46 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc5Q8CG46 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Smc5Q8CG46 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc5Q8CG46 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Smc5Q8CG46 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Smc5Q8CG46 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.49■■□□□ 1.99
Smc5Q8CG46 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc5Q8CG46 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.48■■□□□ 1.99
Smc5Q8CG46 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.48■■□□□ 1.99
Smc5Q8CG46 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Smc5Q8CG46 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Smc5Q8CG46 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Smc5Q8CG46 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Smc5Q8CG46 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Smc5Q8CG46 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Smc5Q8CG46 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Smc5Q8CG46 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Smc5Q8CG46 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Smc5Q8CG46 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Smc5Q8CG46 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Smc5Q8CG46 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc5Q8CG46 AC115037.1-201ENSMUST00000223391 2173 ntBASIC27.44■■□□□ 1.98
Smc5Q8CG46 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Smc5Q8CG46 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Smc5Q8CG46 Gm45364-201ENSMUST00000210883 159 ntBASIC27.44■■□□□ 1.98
Smc5Q8CG46 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc5Q8CG46 Gm6277-202ENSMUST00000224036 2779 ntBASIC27.43■■□□□ 1.98
Smc5Q8CG46 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Gm22567-201ENSMUST00000175542 342 ntBASIC27.43■■□□□ 1.98
Smc5Q8CG46 Mir3960-201ENSMUST00000198213 73 ntBASIC27.43■■□□□ 1.98
Smc5Q8CG46 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC27.43■■□□□ 1.98
Smc5Q8CG46 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Smc5Q8CG46 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Smc5Q8CG46 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Smc5Q8CG46 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.41■■□□□ 1.98
Smc5Q8CG46 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Smc5Q8CG46 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Smc5Q8CG46 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Smc5Q8CG46 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Smc5Q8CG46 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Smc5Q8CG46 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc5Q8CG46 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.38■■□□□ 1.97
Smc5Q8CG46 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Smc5Q8CG46 Terc-201ENSMUST00000082862 423 ntBASIC27.38■■□□□ 1.97
Smc5Q8CG46 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc5Q8CG46 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Smc5Q8CG46 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Smc5Q8CG46 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Smc5Q8CG46 Gm32051-202ENSMUST00000197905 2385 ntBASIC27.37■■□□□ 1.97
Smc5Q8CG46 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc5Q8CG46 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Smc5Q8CG46 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc5Q8CG46 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms