Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdk5rap1Q8BTW8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.04■□□□□ 0.96
Cdk5rap1Q8BTW8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk5rap1Q8BTW8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk5rap1Q8BTW8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdk5rap1Q8BTW8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.03■□□□□ 0.96
Cdk5rap1Q8BTW8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdk5rap1Q8BTW8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdk5rap1Q8BTW8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdk5rap1Q8BTW8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdk5rap1Q8BTW8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdk5rap1Q8BTW8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm42699-201ENSMUST00000198104 1657 ntBASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk5rap1Q8BTW8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk5rap1Q8BTW8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk5rap1Q8BTW8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk5rap1Q8BTW8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk5rap1Q8BTW8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.95■□□□□ 0.95
Cdk5rap1Q8BTW8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk5rap1Q8BTW8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cdk5rap1Q8BTW8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Cdk5rap1Q8BTW8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap1Q8BTW8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.94■□□□□ 0.94
Cdk5rap1Q8BTW8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk5rap1Q8BTW8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.93■□□□□ 0.94
Cdk5rap1Q8BTW8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk5rap1Q8BTW8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cdk5rap1Q8BTW8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk5rap1Q8BTW8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap1Q8BTW8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap1Q8BTW8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.92■□□□□ 0.94
Cdk5rap1Q8BTW8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk5rap1Q8BTW8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Cdk5rap1Q8BTW8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdk5rap1Q8BTW8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdk5rap1Q8BTW8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdk5rap1Q8BTW8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap1Q8BTW8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk5rap1Q8BTW8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.88■□□□□ 0.93
Cdk5rap1Q8BTW8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cdk5rap1Q8BTW8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cdk5rap1Q8BTW8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms