Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zc3hc1Q80YV2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Zc3hc1Q80YV2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.14■□□□□ 0.81
Zc3hc1Q80YV2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zc3hc1Q80YV2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zc3hc1Q80YV2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zc3hc1Q80YV2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3hc1Q80YV2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zc3hc1Q80YV2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3hc1Q80YV2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Zc3hc1Q80YV2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zc3hc1Q80YV2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Zc3hc1Q80YV2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Zc3hc1Q80YV2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zc3hc1Q80YV2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zc3hc1Q80YV2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Zc3hc1Q80YV2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zc3hc1Q80YV2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zc3hc1Q80YV2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zc3hc1Q80YV2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Zc3hc1Q80YV2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Zc3hc1Q80YV2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.05■□□□□ 0.8
Zc3hc1Q80YV2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Zc3hc1Q80YV2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Zc3hc1Q80YV2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zc3hc1Q80YV2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.03■□□□□ 0.8
Zc3hc1Q80YV2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Zc3hc1Q80YV2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Zc3hc1Q80YV2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zc3hc1Q80YV2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Zc3hc1Q80YV2 Gm13889-201ENSMUST00000099689 1386 ntBASIC20■□□□□ 0.79
Zc3hc1Q80YV2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20■□□□□ 0.79
Zc3hc1Q80YV2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20■□□□□ 0.79
Zc3hc1Q80YV2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms