Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Npc1l1Q6T3U4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Npc1l1Q6T3U4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Npc1l1Q6T3U4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Npc1l1Q6T3U4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Npc1l1Q6T3U4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.79■■□□□ 1.88
Npc1l1Q6T3U4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Npc1l1Q6T3U4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Npc1l1Q6T3U4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Npc1l1Q6T3U4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Npc1l1Q6T3U4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Npc1l1Q6T3U4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Npc1l1Q6T3U4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Npc1l1Q6T3U4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Npc1l1Q6T3U4 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.77■■□□□ 1.88
Npc1l1Q6T3U4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Npc1l1Q6T3U4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Npc1l1Q6T3U4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Npc1l1Q6T3U4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Npc1l1Q6T3U4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Npc1l1Q6T3U4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Npc1l1Q6T3U4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Npc1l1Q6T3U4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.74■■□□□ 1.87
Npc1l1Q6T3U4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Npc1l1Q6T3U4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Npc1l1Q6T3U4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Npc1l1Q6T3U4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Npc1l1Q6T3U4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Npc1l1Q6T3U4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Npc1l1Q6T3U4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.7■■□□□ 1.87
Npc1l1Q6T3U4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Npc1l1Q6T3U4 Gm13238-201ENSMUST00000117655 780 ntBASIC26.69■■□□□ 1.86
Npc1l1Q6T3U4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Npc1l1Q6T3U4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Npc1l1Q6T3U4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Npc1l1Q6T3U4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Npc1l1Q6T3U4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Npc1l1Q6T3U4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Npc1l1Q6T3U4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Npc1l1Q6T3U4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
Npc1l1Q6T3U4 Gm15039-201ENSMUST00000118914 875 ntBASIC26.65■■□□□ 1.86
Npc1l1Q6T3U4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Npc1l1Q6T3U4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.65■■□□□ 1.86
Npc1l1Q6T3U4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Npc1l1Q6T3U4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Npc1l1Q6T3U4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Npc1l1Q6T3U4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Npc1l1Q6T3U4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Npc1l1Q6T3U4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Npc1l1Q6T3U4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.64■■□□□ 1.85
Npc1l1Q6T3U4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Npc1l1Q6T3U4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Npc1l1Q6T3U4 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.63■■□□□ 1.85
Npc1l1Q6T3U4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.63■■□□□ 1.85
Npc1l1Q6T3U4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Npc1l1Q6T3U4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Npc1l1Q6T3U4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Npc1l1Q6T3U4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Npc1l1Q6T3U4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Npc1l1Q6T3U4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Npc1l1Q6T3U4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Npc1l1Q6T3U4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
Npc1l1Q6T3U4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Npc1l1Q6T3U4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Npc1l1Q6T3U4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Npc1l1Q6T3U4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Gm15820-201ENSMUST00000201566 728 ntBASIC26.58■■□□□ 1.85
Npc1l1Q6T3U4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Npc1l1Q6T3U4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Npc1l1Q6T3U4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms