Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a1Q6PEM8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a1Q6PEM8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc46a1Q6PEM8 Gm5812-201ENSMUST00000061073 957 ntBASIC19.37■□□□□ 0.69
Slc46a1Q6PEM8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Slc46a1Q6PEM8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a1Q6PEM8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.34■□□□□ 0.69
Slc46a1Q6PEM8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc46a1Q6PEM8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc46a1Q6PEM8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a1Q6PEM8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a1Q6PEM8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a1Q6PEM8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a1Q6PEM8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Slc46a1Q6PEM8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a1Q6PEM8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a1Q6PEM8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc46a1Q6PEM8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a1Q6PEM8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a1Q6PEM8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Slc46a1Q6PEM8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slc46a1Q6PEM8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc46a1Q6PEM8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Gm15546-201ENSMUST00000122095 826 ntBASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a1Q6PEM8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc46a1Q6PEM8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a1Q6PEM8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a1Q6PEM8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a1Q6PEM8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc46a1Q6PEM8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a1Q6PEM8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a1Q6PEM8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms