Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn2bQ56A07 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Scn2bQ56A07 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.84■■□□□ 1.09
Scn2bQ56A07 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.84■■□□□ 1.09
Scn2bQ56A07 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.84■■□□□ 1.09
Scn2bQ56A07 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.83■■□□□ 1.09
Scn2bQ56A07 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.83■■□□□ 1.09
Scn2bQ56A07 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.83■■□□□ 1.09
Scn2bQ56A07 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn2bQ56A07 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Scn2bQ56A07 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn2bQ56A07 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn2bQ56A07 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.82■■□□□ 1.08
Scn2bQ56A07 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn2bQ56A07 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn2bQ56A07 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.81■■□□□ 1.08
Scn2bQ56A07 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Scn2bQ56A07 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn2bQ56A07 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn2bQ56A07 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn2bQ56A07 Gm6311-201ENSMUST00000073790 878 ntBASIC21.8■■□□□ 1.08
Scn2bQ56A07 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Scn2bQ56A07 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn2bQ56A07 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn2bQ56A07 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn2bQ56A07 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn2bQ56A07 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn2bQ56A07 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn2bQ56A07 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn2bQ56A07 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn2bQ56A07 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Scn2bQ56A07 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn2bQ56A07 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn2bQ56A07 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Scn2bQ56A07 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Scn2bQ56A07 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scn2bQ56A07 Gm9812-201ENSMUST00000061934 968 ntBASIC21.76■■□□□ 1.07
Scn2bQ56A07 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn2bQ56A07 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn2bQ56A07 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scn2bQ56A07 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Scn2bQ56A07 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scn2bQ56A07 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Scn2bQ56A07 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn2bQ56A07 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scn2bQ56A07 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn2bQ56A07 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn2bQ56A07 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.73■■□□□ 1.07
Scn2bQ56A07 Mir3960-201ENSMUST00000198213 73 ntBASIC21.73■■□□□ 1.07
Scn2bQ56A07 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn2bQ56A07 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.72■■□□□ 1.07
Scn2bQ56A07 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn2bQ56A07 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.71■■□□□ 1.07
Scn2bQ56A07 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn2bQ56A07 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn2bQ56A07 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn2bQ56A07 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn2bQ56A07 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scn2bQ56A07 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Scn2bQ56A07 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.7■■□□□ 1.06
Scn2bQ56A07 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.7■■□□□ 1.06
Scn2bQ56A07 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.7■■□□□ 1.06
Scn2bQ56A07 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.7■■□□□ 1.06
Scn2bQ56A07 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn2bQ56A07 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.7■■□□□ 1.06
Scn2bQ56A07 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn2bQ56A07 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn2bQ56A07 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn2bQ56A07 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn2bQ56A07 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn2bQ56A07 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms