Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rc3h1Q4VGL6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rc3h1Q4VGL6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.81■■□□□ 1.72
Rc3h1Q4VGL6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Rc3h1Q4VGL6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rc3h1Q4VGL6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rc3h1Q4VGL6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Rc3h1Q4VGL6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rc3h1Q4VGL6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rc3h1Q4VGL6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rc3h1Q4VGL6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rc3h1Q4VGL6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Rc3h1Q4VGL6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Gm5812-201ENSMUST00000061073 957 ntBASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rc3h1Q4VGL6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rc3h1Q4VGL6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
Rc3h1Q4VGL6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rc3h1Q4VGL6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rc3h1Q4VGL6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rc3h1Q4VGL6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rc3h1Q4VGL6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Rc3h1Q4VGL6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rc3h1Q4VGL6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.73■■□□□ 1.71
Rc3h1Q4VGL6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rc3h1Q4VGL6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Rc3h1Q4VGL6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rc3h1Q4VGL6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rc3h1Q4VGL6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rc3h1Q4VGL6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rc3h1Q4VGL6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rc3h1Q4VGL6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rc3h1Q4VGL6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.71
Rc3h1Q4VGL6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rc3h1Q4VGL6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rc3h1Q4VGL6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rc3h1Q4VGL6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Rc3h1Q4VGL6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Rc3h1Q4VGL6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.68■■□□□ 1.7
Rc3h1Q4VGL6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rc3h1Q4VGL6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Rc3h1Q4VGL6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Rc3h1Q4VGL6 Gm45444-201ENSMUST00000211394 898 ntBASIC25.66■■□□□ 1.7
Rc3h1Q4VGL6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rc3h1Q4VGL6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.66■■□□□ 1.7
Rc3h1Q4VGL6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Gm43566-201ENSMUST00000196851 808 ntBASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Rc3h1Q4VGL6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.64■■□□□ 1.7
Rc3h1Q4VGL6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.64■■□□□ 1.7
Rc3h1Q4VGL6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rc3h1Q4VGL6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rc3h1Q4VGL6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rc3h1Q4VGL6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.63■■□□□ 1.69
Rc3h1Q4VGL6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rc3h1Q4VGL6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rc3h1Q4VGL6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms