Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1aP97445 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1aP97445 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
Cacna1aP97445 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.61■□□□□ 0.89
Cacna1aP97445 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1aP97445 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1aP97445 Gm13241-201ENSMUST00000094493 780 ntBASIC20.61■□□□□ 0.89
Cacna1aP97445 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1aP97445 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1aP97445 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cacna1aP97445 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.59■□□□□ 0.89
Cacna1aP97445 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.59■□□□□ 0.89
Cacna1aP97445 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1aP97445 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cacna1aP97445 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1aP97445 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cacna1aP97445 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1aP97445 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1aP97445 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.57■□□□□ 0.88
Cacna1aP97445 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacna1aP97445 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Gm21956-201ENSMUST00000179946 522 ntBASIC20.56■□□□□ 0.88
Cacna1aP97445 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacna1aP97445 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.56■□□□□ 0.88
Cacna1aP97445 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.56■□□□□ 0.88
Cacna1aP97445 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cacna1aP97445 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1aP97445 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacna1aP97445 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1aP97445 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.55■□□□□ 0.88
Cacna1aP97445 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.55■□□□□ 0.88
Cacna1aP97445 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1aP97445 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1aP97445 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1aP97445 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1aP97445 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacna1aP97445 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1aP97445 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1aP97445 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1aP97445 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1aP97445 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.52■□□□□ 0.88
Cacna1aP97445 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1aP97445 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Cacna1aP97445 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.52■□□□□ 0.88
Cacna1aP97445 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.52■□□□□ 0.88
Cacna1aP97445 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.52■□□□□ 0.88
Cacna1aP97445 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1aP97445 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1aP97445 Gm29257-201ENSMUST00000186115 639 ntBASIC20.51■□□□□ 0.87
Cacna1aP97445 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1aP97445 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.51■□□□□ 0.87
Cacna1aP97445 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.51■□□□□ 0.87
Cacna1aP97445 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1aP97445 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1aP97445 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1aP97445 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1aP97445 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1aP97445 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1aP97445 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cacna1aP97445 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.49■□□□□ 0.87
Cacna1aP97445 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cacna1aP97445 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1aP97445 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1aP97445 Etf1-202ENSMUST00000180351 108 ntBASIC20.48■□□□□ 0.87
Cacna1aP97445 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1aP97445 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1aP97445 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1aP97445 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1aP97445 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1aP97445 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1aP97445 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.46■□□□□ 0.87
Cacna1aP97445 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cacna1aP97445 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1aP97445 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.46■□□□□ 0.87
Cacna1aP97445 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.46■□□□□ 0.87
Cacna1aP97445 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.46■□□□□ 0.87
Cacna1aP97445 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.46■□□□□ 0.87
Cacna1aP97445 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1aP97445 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1aP97445 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1aP97445 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1aP97445 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1aP97445 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.45■□□□□ 0.86
Cacna1aP97445 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.44■□□□□ 0.86
Cacna1aP97445 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms