Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SgcaP82350 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcaP82350 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcaP82350 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcaP82350 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SgcaP82350 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SgcaP82350 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SgcaP82350 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcaP82350 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SgcaP82350 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.45■□□□□ 0.54
SgcaP82350 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SgcaP82350 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcaP82350 Zfp131-205ENSMUST00000223812 663 ntBASIC18.45■□□□□ 0.54
SgcaP82350 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SgcaP82350 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SgcaP82350 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SgcaP82350 Gm24970-201ENSMUST00000175582 82 ntBASIC18.44■□□□□ 0.54
SgcaP82350 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcaP82350 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SgcaP82350 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.43■□□□□ 0.54
SgcaP82350 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcaP82350 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SgcaP82350 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SgcaP82350 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SgcaP82350 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SgcaP82350 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.42■□□□□ 0.54
SgcaP82350 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SgcaP82350 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcaP82350 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcaP82350 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SgcaP82350 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SgcaP82350 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SgcaP82350 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcaP82350 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcaP82350 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcaP82350 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.4■□□□□ 0.54
SgcaP82350 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcaP82350 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.4■□□□□ 0.54
SgcaP82350 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcaP82350 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcaP82350 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.39■□□□□ 0.54
SgcaP82350 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SgcaP82350 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcaP82350 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SgcaP82350 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.39■□□□□ 0.53
SgcaP82350 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SgcaP82350 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcaP82350 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcaP82350 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SgcaP82350 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.38■□□□□ 0.53
SgcaP82350 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Gm9397-201ENSMUST00000200125 605 ntBASIC18.38■□□□□ 0.53
SgcaP82350 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.38■□□□□ 0.53
SgcaP82350 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcaP82350 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.37■□□□□ 0.53
SgcaP82350 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcaP82350 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
SgcaP82350 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcaP82350 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcaP82350 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcaP82350 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcaP82350 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcaP82350 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcaP82350 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcaP82350 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcaP82350 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcaP82350 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcaP82350 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SgcaP82350 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SgcaP82350 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.34■□□□□ 0.53
SgcaP82350 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcaP82350 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcaP82350 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SgcaP82350 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcaP82350 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SgcaP82350 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SgcaP82350 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SgcaP82350 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SgcaP82350 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcaP82350 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.33■□□□□ 0.52
SgcaP82350 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.32■□□□□ 0.52
SgcaP82350 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.32■□□□□ 0.52
SgcaP82350 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcaP82350 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcaP82350 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcaP82350 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SgcaP82350 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SgcaP82350 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcaP82350 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcaP82350 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcaP82350 Notumos-201ENSMUST00000151998 2659 ntBASIC18.3■□□□□ 0.52
SgcaP82350 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcaP82350 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SgcaP82350 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SgcaP82350 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms