Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.41■□□□□ 0.54
Cks2P56390 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.41■□□□□ 0.54
Cks2P56390 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks2P56390 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cks2P56390 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cks2P56390 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Cks2P56390 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.39■□□□□ 0.53
Cks2P56390 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cks2P56390 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cks2P56390 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.38■□□□□ 0.53
Cks2P56390 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cks2P56390 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks2P56390 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks2P56390 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cks2P56390 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks2P56390 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.37■□□□□ 0.53
Cks2P56390 Gm6821-201ENSMUST00000107540 542 ntBASIC18.36■□□□□ 0.53
Cks2P56390 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.36■□□□□ 0.53
Cks2P56390 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks2P56390 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks2P56390 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks2P56390 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cks2P56390 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.35■□□□□ 0.53
Cks2P56390 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks2P56390 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.35■□□□□ 0.53
Cks2P56390 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks2P56390 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cks2P56390 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.34■□□□□ 0.53
Cks2P56390 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cks2P56390 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cks2P56390 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cks2P56390 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.34■□□□□ 0.53
Cks2P56390 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.34■□□□□ 0.53
Cks2P56390 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cks2P56390 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cks2P56390 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cks2P56390 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cks2P56390 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cks2P56390 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.32■□□□□ 0.52
Cks2P56390 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cks2P56390 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cks2P56390 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cks2P56390 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cks2P56390 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cks2P56390 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Cks2P56390 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.3■□□□□ 0.52
Cks2P56390 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cks2P56390 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cks2P56390 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.3■□□□□ 0.52
Cks2P56390 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cks2P56390 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cks2P56390 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.29■□□□□ 0.52
Cks2P56390 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.29■□□□□ 0.52
Cks2P56390 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cks2P56390 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks2P56390 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks2P56390 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cks2P56390 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks2P56390 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.28■□□□□ 0.52
Cks2P56390 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.28■□□□□ 0.52
Cks2P56390 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cks2P56390 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cks2P56390 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cks2P56390 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cks2P56390 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cks2P56390 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cks2P56390 Gm4799-201ENSMUST00000095396 657 ntBASIC18.27■□□□□ 0.52
Cks2P56390 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cks2P56390 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cks2P56390 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms