Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SqleP52019 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.62■■□□□ 1.53
SqleP52019 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.62■■□□□ 1.53
SqleP52019 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SqleP52019 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SqleP52019 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.61■■□□□ 1.53
SqleP52019 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SqleP52019 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SqleP52019 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SqleP52019 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SqleP52019 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
SqleP52019 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SqleP52019 Gm22238-201ENSMUST00000175222 88 ntBASIC24.58■■□□□ 1.53
SqleP52019 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.58■■□□□ 1.53
SqleP52019 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.58■■□□□ 1.53
SqleP52019 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SqleP52019 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.57■■□□□ 1.52
SqleP52019 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.56■■□□□ 1.52
SqleP52019 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.56■■□□□ 1.52
SqleP52019 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SqleP52019 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SqleP52019 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SqleP52019 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SqleP52019 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SqleP52019 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SqleP52019 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.54■■□□□ 1.52
SqleP52019 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SqleP52019 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SqleP52019 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SqleP52019 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SqleP52019 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SqleP52019 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SqleP52019 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SqleP52019 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SqleP52019 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.51■■□□□ 1.51
SqleP52019 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SqleP52019 Zxda-201ENSMUST00000117281 2621 ntBASIC24.51■■□□□ 1.51
SqleP52019 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.51■■□□□ 1.51
SqleP52019 Gm12821-201ENSMUST00000120022 600 ntBASIC24.5■■□□□ 1.51
SqleP52019 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
SqleP52019 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.5■■□□□ 1.51
SqleP52019 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.5■■□□□ 1.51
SqleP52019 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SqleP52019 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
SqleP52019 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.49■■□□□ 1.51
SqleP52019 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SqleP52019 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.49■■□□□ 1.51
SqleP52019 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SqleP52019 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SqleP52019 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.49■■□□□ 1.51
SqleP52019 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SqleP52019 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SqleP52019 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SqleP52019 Gm12922-201ENSMUST00000120626 809 ntBASIC24.48■■□□□ 1.51
SqleP52019 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SqleP52019 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SqleP52019 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SqleP52019 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SqleP52019 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SqleP52019 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.46■■□□□ 1.51
SqleP52019 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SqleP52019 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.46■■□□□ 1.51
SqleP52019 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SqleP52019 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SqleP52019 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SqleP52019 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.45■■□□□ 1.5
SqleP52019 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.45■■□□□ 1.5
SqleP52019 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.45■■□□□ 1.5
SqleP52019 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SqleP52019 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SqleP52019 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SqleP52019 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SqleP52019 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SqleP52019 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SqleP52019 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SqleP52019 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SqleP52019 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SqleP52019 Gm40881-201ENSMUST00000223397 166 ntBASIC24.42■■□□□ 1.5
SqleP52019 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SqleP52019 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SqleP52019 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SqleP52019 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SqleP52019 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SqleP52019 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.4■■□□□ 1.5
SqleP52019 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.4■■□□□ 1.5
SqleP52019 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SqleP52019 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.39■■□□□ 1.49
SqleP52019 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SqleP52019 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SqleP52019 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SqleP52019 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.38■■□□□ 1.49
SqleP52019 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SqleP52019 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.37■■□□□ 1.49
SqleP52019 Gm27454-201ENSMUST00000185090 204 ntBASIC24.37■■□□□ 1.49
SqleP52019 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.37■■□□□ 1.49
SqleP52019 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.37■■□□□ 1.49
SqleP52019 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.37■■□□□ 1.49
SqleP52019 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SqleP52019 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SqleP52019 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms