Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccr4P51680 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Ccr4P51680 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr4P51680 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ccr4P51680 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccr4P51680 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr4P51680 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr4P51680 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccr4P51680 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccr4P51680 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr4P51680 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr4P51680 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr4P51680 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr4P51680 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr4P51680 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr4P51680 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr4P51680 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccr4P51680 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccr4P51680 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.33■□□□□ 0.84
Ccr4P51680 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccr4P51680 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr4P51680 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr4P51680 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr4P51680 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccr4P51680 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr4P51680 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ccr4P51680 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr4P51680 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr4P51680 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccr4P51680 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr4P51680 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccr4P51680 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr4P51680 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr4P51680 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccr4P51680 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccr4P51680 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr4P51680 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccr4P51680 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr4P51680 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccr4P51680 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccr4P51680 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Ccr4P51680 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr4P51680 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr4P51680 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr4P51680 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccr4P51680 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccr4P51680 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccr4P51680 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccr4P51680 Scarna2-201ENSMUST00000157560 414 ntBASIC20.27■□□□□ 0.84
Ccr4P51680 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccr4P51680 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr4P51680 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccr4P51680 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccr4P51680 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccr4P51680 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccr4P51680 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr4P51680 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr4P51680 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr4P51680 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccr4P51680 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccr4P51680 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.25■□□□□ 0.83
Ccr4P51680 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr4P51680 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr4P51680 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccr4P51680 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccr4P51680 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccr4P51680 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr4P51680 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccr4P51680 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccr4P51680 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr4P51680 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr4P51680 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ccr4P51680 Gm9806-201ENSMUST00000051080 552 ntBASIC20.24■□□□□ 0.83
Ccr4P51680 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr4P51680 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccr4P51680 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr4P51680 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr4P51680 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr4P51680 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr4P51680 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
Ccr4P51680 Gm16437-201ENSMUST00000025669 507 ntBASIC20.23■□□□□ 0.83
Ccr4P51680 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.23■□□□□ 0.83
Ccr4P51680 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccr4P51680 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccr4P51680 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccr4P51680 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccr4P51680 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr4P51680 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Ccr4P51680 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccr4P51680 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccr4P51680 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccr4P51680 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms