Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BdnfP21237 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BdnfP21237 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BdnfP21237 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BdnfP21237 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.08■□□□□ 0.97
BdnfP21237 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.08■□□□□ 0.97
BdnfP21237 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
BdnfP21237 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
BdnfP21237 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
BdnfP21237 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
BdnfP21237 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.07■□□□□ 0.96
BdnfP21237 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BdnfP21237 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
BdnfP21237 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BdnfP21237 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.06■□□□□ 0.96
BdnfP21237 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BdnfP21237 Gm4799-201ENSMUST00000095396 657 ntBASIC21.06■□□□□ 0.96
BdnfP21237 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BdnfP21237 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BdnfP21237 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BdnfP21237 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.05■□□□□ 0.96
BdnfP21237 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BdnfP21237 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BdnfP21237 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
BdnfP21237 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.05■□□□□ 0.96
BdnfP21237 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BdnfP21237 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BdnfP21237 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BdnfP21237 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BdnfP21237 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
BdnfP21237 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.03■□□□□ 0.96
BdnfP21237 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BdnfP21237 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BdnfP21237 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
BdnfP21237 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BdnfP21237 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BdnfP21237 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.02■□□□□ 0.96
BdnfP21237 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BdnfP21237 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.02■□□□□ 0.96
BdnfP21237 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.02■□□□□ 0.96
BdnfP21237 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
BdnfP21237 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
BdnfP21237 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BdnfP21237 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BdnfP21237 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
BdnfP21237 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BdnfP21237 Gm7432-201ENSMUST00000210343 879 ntBASIC21.01■□□□□ 0.95
BdnfP21237 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BdnfP21237 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.01■□□□□ 0.95
BdnfP21237 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 Gm13889-201ENSMUST00000099689 1386 ntBASIC21■□□□□ 0.95
BdnfP21237 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
BdnfP21237 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21■□□□□ 0.95
BdnfP21237 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21■□□□□ 0.95
BdnfP21237 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21■□□□□ 0.95
BdnfP21237 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BdnfP21237 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
BdnfP21237 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.99■□□□□ 0.95
BdnfP21237 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BdnfP21237 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BdnfP21237 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BdnfP21237 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BdnfP21237 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BdnfP21237 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BdnfP21237 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BdnfP21237 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BdnfP21237 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.97■□□□□ 0.95
BdnfP21237 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BdnfP21237 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BdnfP21237 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BdnfP21237 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.96■□□□□ 0.95
BdnfP21237 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BdnfP21237 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BdnfP21237 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BdnfP21237 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BdnfP21237 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BdnfP21237 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BdnfP21237 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BdnfP21237 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BdnfP21237 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
BdnfP21237 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
BdnfP21237 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BdnfP21237 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BdnfP21237 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BdnfP21237 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BdnfP21237 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
BdnfP21237 Gm11599-201ENSMUST00000118720 878 ntBASIC20.94■□□□□ 0.94
BdnfP21237 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BdnfP21237 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BdnfP21237 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BdnfP21237 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BdnfP21237 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BdnfP21237 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BdnfP21237 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
BdnfP21237 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.93■□□□□ 0.94
BdnfP21237 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms