Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
NefmP08553 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
NefmP08553 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.73■■■□□ 2.83
NefmP08553 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
NefmP08553 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
NefmP08553 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
NefmP08553 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NefmP08553 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
NefmP08553 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NefmP08553 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NefmP08553 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NefmP08553 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
NefmP08553 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
NefmP08553 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
NefmP08553 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
NefmP08553 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.7■■■□□ 2.83
NefmP08553 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC32.7■■■□□ 2.82
NefmP08553 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NefmP08553 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
NefmP08553 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
NefmP08553 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NefmP08553 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.68■■■□□ 2.82
NefmP08553 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NefmP08553 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NefmP08553 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
NefmP08553 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.67■■■□□ 2.82
NefmP08553 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NefmP08553 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NefmP08553 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
NefmP08553 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.66■■■□□ 2.82
NefmP08553 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
NefmP08553 Gm9812-201ENSMUST00000061934 968 ntBASIC32.66■■■□□ 2.82
NefmP08553 Gm4799-201ENSMUST00000095396 657 ntBASIC32.66■■■□□ 2.82
NefmP08553 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
NefmP08553 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
NefmP08553 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
NefmP08553 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NefmP08553 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.64■■■□□ 2.82
NefmP08553 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC32.63■■■□□ 2.81
NefmP08553 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
NefmP08553 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
NefmP08553 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC32.63■■■□□ 2.81
NefmP08553 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
NefmP08553 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
NefmP08553 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC32.62■■■□□ 2.81
NefmP08553 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
NefmP08553 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
NefmP08553 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC32.61■■■□□ 2.81
NefmP08553 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NefmP08553 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NefmP08553 AC153911.1-201ENSMUST00000220378 758 ntBASIC32.6■■■□□ 2.81
NefmP08553 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
NefmP08553 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NefmP08553 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NefmP08553 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NefmP08553 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NefmP08553 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NefmP08553 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC32.58■■■□□ 2.81
NefmP08553 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC32.58■■■□□ 2.81
NefmP08553 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
NefmP08553 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
NefmP08553 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
NefmP08553 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
NefmP08553 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC32.57■■■□□ 2.8
NefmP08553 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
NefmP08553 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC32.56■■■□□ 2.8
NefmP08553 Gm22567-201ENSMUST00000175542 342 ntBASIC32.56■■■□□ 2.8
NefmP08553 AC122317.2-201ENSMUST00000218708 1248 ntBASIC32.56■■■□□ 2.8
NefmP08553 Gm8503-201ENSMUST00000118131 455 ntBASIC32.55■■■□□ 2.8
NefmP08553 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC32.55■■■□□ 2.8
NefmP08553 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NefmP08553 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
NefmP08553 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
NefmP08553 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC32.55■■■□□ 2.8
NefmP08553 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
NefmP08553 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
NefmP08553 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
NefmP08553 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
NefmP08553 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
NefmP08553 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
NefmP08553 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.53■■■□□ 2.8
NefmP08553 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
NefmP08553 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC32.52■■■□□ 2.8
NefmP08553 Gm9910-201ENSMUST00000195385 1550 ntBASIC32.5■■■□□ 2.79
NefmP08553 AC153962.1-201ENSMUST00000218530 1948 ntBASIC32.5■■■□□ 2.79
NefmP08553 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
NefmP08553 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NefmP08553 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
NefmP08553 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NefmP08553 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.49■■■□□ 2.79
NefmP08553 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.49■■■□□ 2.79
NefmP08553 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
NefmP08553 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
NefmP08553 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC32.49■■■□□ 2.79
NefmP08553 Gm12818-201ENSMUST00000117562 1349 ntBASIC32.49■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms