Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Alx3O70137 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.99■□□□□ 0.79
Alx3O70137 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Alx3O70137 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.98■□□□□ 0.79
Alx3O70137 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx3O70137 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx3O70137 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Alx3O70137 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.98■□□□□ 0.79
Alx3O70137 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx3O70137 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Alx3O70137 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Alx3O70137 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.97■□□□□ 0.79
Alx3O70137 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Alx3O70137 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx3O70137 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Alx3O70137 Gm11599-201ENSMUST00000118720 878 ntBASIC19.97■□□□□ 0.79
Alx3O70137 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx3O70137 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Alx3O70137 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Alx3O70137 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Mir3960-201ENSMUST00000198213 73 ntBASIC19.96■□□□□ 0.79
Alx3O70137 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.96■□□□□ 0.79
Alx3O70137 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Alx3O70137 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.95■□□□□ 0.78
Alx3O70137 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx3O70137 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx3O70137 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx3O70137 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Alx3O70137 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx3O70137 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx3O70137 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Alx3O70137 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Alx3O70137 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Alx3O70137 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx3O70137 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Alx3O70137 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx3O70137 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Alx3O70137 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Alx3O70137 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx3O70137 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx3O70137 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx3O70137 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Alx3O70137 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx3O70137 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.91■□□□□ 0.78
Alx3O70137 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx3O70137 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Alx3O70137 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Alx3O70137 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.91■□□□□ 0.78
Alx3O70137 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Alx3O70137 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.91■□□□□ 0.78
Alx3O70137 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.9■□□□□ 0.78
Alx3O70137 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Alx3O70137 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Alx3O70137 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx3O70137 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.89■□□□□ 0.77
Alx3O70137 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Alx3O70137 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.88■□□□□ 0.77
Alx3O70137 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Alx3O70137 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Alx3O70137 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Alx3O70137 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Alx3O70137 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx3O70137 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.86■□□□□ 0.77
Alx3O70137 Gm45364-201ENSMUST00000210883 159 ntBASIC19.86■□□□□ 0.77
Alx3O70137 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Alx3O70137 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx3O70137 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Alx3O70137 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Alx3O70137 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Alx3O70137 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Alx3O70137 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Alx3O70137 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.85■□□□□ 0.77
Alx3O70137 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx3O70137 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Alx3O70137 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Alx3O70137 Terc-201ENSMUST00000082862 423 ntBASIC19.84■□□□□ 0.77
Alx3O70137 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Alx3O70137 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Alx3O70137 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Alx3O70137 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.83■□□□□ 0.77
Alx3O70137 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Alx3O70137 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Alx3O70137 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Alx3O70137 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Alx3O70137 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms